SC23 Proceedings

The International Conference for High Performance Computing, Networking, Storage, and Analysis

ACM Student Research Competition Poster Archive

A Heterogeneous, In Transit Approach for Large Scale Cellular Modeling


Student: Ayman Yousef (Duke University)
Supervisor: Amanda Randles (Duke University)

Abstract: The field of in silico cellular modeling has made notable strides in number of cells that can be simultaneously modeled. While computational capabilities have grown exponentially, I/O performance has lagged behind. To address this issue, we present an in-transit approach to enable in situ visualization and analysis of large-scale fluid-structure-interaction models on leadership-class systems. We delineate the proposed framework and demonstrate the feasibility of this approach by measuring overhead introduced. The proposed framework provides a valuable tool for both at-scale debugging and enabling scientific discovery, which would be difficult to achieve otherwise.

ACM-SRC Semi-Finalist: no

Poster: PDF
Poster Summary: PDF


Back to Poster Archive Listing